9UBU | pdb_00009ubu

The capsid structure of Mink Enteritis Virus

• PDB DOI: https://doi.org/10.2210/pdb9UBU/pdb
• EM Map EMD-62771: EMDB EMDataResource

• Classification: VIRUS LIKE PARTICLE
• Organism(s): Mink enteritis virus
• Expression System: Saccharomyces cerevisiae
• Mutation(s): No 


• Deposited: 2025-04-03 Released: 2026-10-07 
• Deposition Author(s): Meng, G., Li, J.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

The capsid structure of Mink Enteritis Virus

Meng, G., Li, J.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Homo 60-mer - A60 

Biological assembly 1 assigned by authors and generated by (software)

Macromolecule Content 

• Total Structure Weight: 64.77 kDa 
• Atom Count: 4,339 
• Modeled Residue Count: 548 
• Deposited Residue Count: 584 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
VP2	A	584	Mink enteritis virus	Mutation(s): 0
UniProt
Find proteins for A0A0S2I753 (Mink enteritis virus) Explore A0A0S2I753  Go to UniProtKB:  A0A0S2I753

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.50 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.20.1_4487
RECONSTRUCTION	RELION	4.0

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2026-10-07 
Deposition Author(s): Meng, G., Li, J.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2026-10-07
  Type: Initial release