Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
Liu, F., Shoichet, B.K.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
AmpC Beta-lactamase | 377 | Escherichia coli | Mutation(s): 0  Gene Names: ampC, ampA, b4150, JW4111 EC: 3.5.2.6 | ![]() | |
UniProt | |||||
Find proteins for P00811 (Escherichia coli (strain K12)) Explore P00811  Go to UniProtKB:  P00811 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00811 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1AU0 (Subject of Investigation/LOI) Query on A1AU0 | C [auth A], D [auth B] | (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid C19 H23 N O4 MJMYSNTUGIKOIH-WWTUQBGBSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 119.03 | α = 90 |
b = 78.17 | β = 115.48 |
c = 97.72 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | -- |