SPD: SPERMIDINE
SPD is a Ligand Of Interest in 6XXK designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 6XXK_SPD_A_401 | 82% | 90% | 0.08 | 0.938 | 0.32 | 0.22 | - | - | 1 | 0 | 100% | 1 |
| 6XXK_SPD_B_401 | 65% | 89% | 0.131 | 0.936 | 0.36 | 0.23 | - | - | 3 | 0 | 100% | 1 |
| 8A0F_SPD_A_401 | 64% | 64% | 0.126 | 0.925 | 0.41 | 0.81 | - | - | 2 | 0 | 100% | 1 |
| 7A6T_SPD_B_1602 | 60% | 91% | 0.156 | 0.945 | 0.19 | 0.32 | - | - | 8 | 0 | 100% | 1 |
| 6XXJ_SPD_A_401 | 51% | 72% | 0.148 | 0.902 | 0.43 | 0.53 | - | - | 9 | 0 | 100% | 1 |
| 8A0G_SPD_B_401 | 48% | 93% | 0.181 | 0.926 | 0.11 | 0.32 | - | - | 6 | 0 | 100% | 0.65 |
| 3C6K_SPD_A_501 | 100% | 52% | 0.031 | 0.993 | 0.37 | 1.31 | - | 1 | 1 | 0 | 100% | 1 |
| 9VYL_SPD_A_303 | 99% | 15% | 0.045 | 0.984 | 0.98 | 2.61 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4C0Z_SPD_A_1223 | 93% | 59% | 0.064 | 0.966 | 0.7 | 0.73 | - | - | 3 | 0 | 100% | 1 |
| 5JC9_SPD_DA_3190 | 90% | 97% | 0.089 | 0.979 | 0.12 | 0.19 | - | - | 0 | 0 | 100% | 1 |
| 7XJM_SPD_B_401 | 89% | 89% | 0.078 | 0.961 | 0.25 | 0.33 | - | - | 0 | 0 | 100% | 1 |