GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6B0Y designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6B0Y_GDP_A_205 | 95% | 42% | 0.079 | 0.982 | 1.13 | 1.13 | - | 2 | 0 | 0 | 100% | 1 |
| 6B0Y_GDP_B_206 | 95% | 41% | 0.081 | 0.983 | 0.92 | 1.38 | - | 3 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
| 9P44_GDP_B_201 | 100% | 45% | 0.02 | 0.997 | 1.05 | 1.08 | 3 | 2 | 0 | 0 | 100% | 1 |
| 9C43_GDP_B_201 | 100% | 54% | 0.016 | 0.997 | 1.08 | 0.72 | 2 | - | 0 | 0 | 100% | 1 |
| 9C41_GDP_B_202 | 100% | 53% | 0.02 | 0.997 | 1.07 | 0.76 | 3 | - | 0 | 0 | 100% | 1 |
| 9C3Z_GDP_B_202 | 100% | 29% | 0.018 | 0.997 | 1.51 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_B_201 | 100% | 55% | 0.018 | 0.998 | 1.08 | 0.69 | 3 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
