SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5B5E designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5B5E_SQD_a_412 | 63% | 24% | 0.122 | 0.917 | 0.93 | 2.14 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_A_410 | 61% | 26% | 0.121 | 0.908 | 0.99 | 2 | 3 | 17 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_A_415 | 49% | 27% | 0.127 | 0.871 | 1.03 | 1.91 | 3 | 12 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_a_417 | 46% | 37% | 0.125 | 0.857 | 1.1 | 1.35 | 5 | 4 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_B_621 | 38% | 33% | 0.145 | 0.846 | 1.03 | 1.6 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_L_102 | 38% | 30% | 0.146 | 0.846 | 1.08 | 1.68 | 3 | 12 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_D_408 | 25% | 19% | 0.158 | 0.823 | 1.22 | 2.21 | 4 | 13 | 0 | 0 | 83% | 1 |
| 5B5E_SQD_x_101 | 22% | 31% | 0.16 | 0.82 | 1.26 | 1.46 | 3 | 9 | 0 | 0 | 76% | 1 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 0 | 0 | 100% | 1 |
| 5B66_SQD_a_409 | 79% | 23% | 0.091 | 0.936 | 1.01 | 2.11 | 4 | 11 | 0 | 0 | 100% | 1 |
| 3WU2_SQD_A_412 | 78% | 25% | 0.089 | 0.932 | 0.86 | 2.15 | 2 | 17 | 5 | 0 | 100% | 1 |
| 6W1V_SQD_A_409 | 78% | 25% | 0.089 | 0.937 | 1.02 | 2.02 | 4 | 16 | 0 | 0 | 96% | 1 |
