2LI5 | pdb_00002li5

NMR structure of Atg8-Atg7C30 complex

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
2	2D 1H-13C HSQC aliphatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
3	3D 1H-15N NOESY	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
4	3D 1H-13C NOESY aliphatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
5	3D HCCH-TOCSY aliphatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
6	2D HbCbCgCdHd	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
7	2D 1H-13C HSQC aromatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
8	3D HNCA	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
9	3D HNCO	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
10	3D 1H-13C NOESY aromatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
11	3D CBCA(CO)NH	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
12	2D 1H-15N HSQC	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
13	3D HNCO	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
14	3D HNCACB	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
15	3D HNCACB	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
16	3D 1H-15N NOESY	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
17	3D C(CO)NH	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
18	2D 1H-13C HSQC aliphatic	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
19	3D 1H-13C NOESY aliphatic	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
20	2D 1H-13C HSQC aromatic	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
21	3D HCCH-TOCSY aliphatic	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298
22	3D HCCH-TOCSY aromatic	0.8 mM [U-99% 13C; U-99% 15N] Atg8K26P-1, 2.0 mM ATG7C30-2, 20 mM sodium phosphate-3, 150 mM sodium chloride-4, 5 mM DTT-5, 5 mM DSS-6, 0.02 % sodium azide-7	90% H2O/10% D2O	170	6.8	ambient	298
23	3D 1H-13C NOESY aromatic	0.5 mM [U-99% 13C; U-99% 15N] ATG7C30-8, 1.25 mM Atg8K26P-9, 20 mM sodium phosphate-10, 150 mM sodium chloride-11, 5 mM DTT-12, 5 mM DSS-13, 0.02 % sodium azide-14	90% H2O/10% D2O	170	6.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	800
2	Varian	INOVA	600
3	Varian	INOVA	600
4	Varian	INOVA	500

NMR Refinement
Method	Details	Software
simulated annealing, torsion angle dynamics		VNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	19
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR	6.1C	Varian
2	processing	NMRPipe	5.2	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	chemical shift assignment	Sparky	3.113	Goddard
4	peak picking	Sparky	3.113	Goddard
5	refinement	Sparky	3.113	Goddard
6	data analysis	TALOS+	1.01	Chen, Cornilescu, Delaglio, Bax
7	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
8	refinement	CYANA	2.1	Guntert, Mumenthaler and Wuthrich