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 9TS7 | pdb_00009ts7

Structure of the Plant mitochondrial initiation complex, (SSU, LSU, initiator tRNA, mRNA)


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]26S rRNA---
B [auth 1B]Large ribosomal subunit protein uL2 C-terminal domain-containing protein
C [auth 1C]uL2m N-ter mitochondrial---
D [auth 1D]50S ribosomal protein L3-2, chloroplastic---
E [auth 1E]Large ribosomal subunit protein uL4m---
F [auth 1F]Large ribosomal subunit protein uL5m---
G [auth 1G]Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
H [auth 1H]Large ribosomal subunit protein bL9c
I [auth 1I]Large ribosomal subunit protein uL10c- -
J [auth 1J]Large ribosomal subunit protein uL11m---
K [auth 1K]50S ribosomal protein L13
L [auth 1L]uL14m
M [auth 1M]Large ribosomal subunit protein uL15/eL18 domain-containing protein
N [auth 1N]Large ribosomal subunit protein uL16m|---
O [auth 1O]50S ribosomal protein L17---
P [auth 1P]Ribosomal protein L18e/L15P domain-containing protein
Q [auth 1Q]bL19m
S [auth 1S]bL21m---
U [auth 1U]Large ribosomal subunit protein uL23m
V [auth 1V]KOW domain-containing protein---
W [auth 1W]bL25-2m---
X [auth 1X]bL25m
Y [auth 1Y]50S ribosomal protein L27
Z [auth 1Z]Large ribosomal subunit protein bL28m---
CA [auth 1c]bL31m---
DA [auth 1d]Large ribosomal subunit protein bL32m---
GA [auth 1g]50S ribosomal protein L35
IA [auth 1i]mL40- -
KA [auth 1k]Large ribosomal subunit protein mL43
LA [auth 1l]Large ribosomal subunit protein mL46 -
MA [auth 1m]Large ribosomal subunit protein mL53---
NA [auth 1o]Large ribosomal subunit protein mL54---
OA [auth 1p]MRPL25 domain-containing protein---
PA [auth 1q]mL60- - -
RA [auth 1s]mL87- -
SA [auth 1t]Pentacotripeptide-repeat region of PRORP domain-containing protein---
TA [auth 1u]mL102---
VA [auth 2]18S rRNA---
XA [auth 5]tRNA---
YA [auth 6]mRNA---
ZA [auth A]Ribosomal protein S2
BB [auth C]uS4m---
CB [auth D]S5 DRBM domain-containing protein
DB [auth E]bS6m
EB [auth F]uS7m---
FB [auth G]uS8m---
GB [auth H]30S ribosomal protein S9---
HB [auth I]Small ribosomal subunit protein uS10 domain-containing protein
IB [auth J]Ribosomal protein S11---
JB [auth K]uS12m---
KB [auth L]uS13m
LB [auth M]Small ribosomal subunit protein uS14m
MB [auth N]Small ribosomal subunit protein uS15c
NB [auth O]30S ribosomal protein S16
OB [auth P]Small ribosomal subunit protein uS17c---
PB [auth Q]bS18m---
QB [auth R]uS19m---
SB [auth T]30S ribosomal protein S31, mitochondrial-
TB [auth U]Small ribosomal subunit protein mS23---
UB [auth V]mS26---
VB [auth W]Small ribosomal subunit protein mS29 -
WB [auth X]mS31/mS46---
XB [auth Y]MOSC domain-containing protein---
YB [auth Z]mS34---
ZB [auth a]Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein---
BC [auth c]Small ribosomal subunit protein mS38---
CC [auth d]Small ribosomal subunit protein mS41 SAM domain-containing protein- - -
DC [auth e]mS45-
EC [auth f]mS47---
FC [auth h]Adenylyl cyclase---
HC [auth k]RRM domain-containing protein - -
GC [auth i]PROP1-like PPR domain-containing protein---
AC [auth b]mS37---
RB [auth S]Ribosomal protein S21
AB [auth B]Small ribosomal subunit protein uS3m
WA [auth 3]5S rRNA---
UA [auth 1v]mL104---
QA [auth 1r]mL80- - -
JA [auth 1j]39S ribosomal protein L41-A, mitochondrial
HA [auth 1h]Ribosomal protein---
FA [auth 1f]Large ribosomal subunit protein bL34m
EA [auth 1e]bL33m---
BA [auth 1b]Large ribosomal subunit protein uL30m
AA [auth 1a]Cation-transporting P-type ATPase N-terminal domain-containing protein---
T [auth 1T]Large ribosomal subunit protein uL22c
R [auth 1R]50S ribosomal protein L20

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth 1B]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
B [auth 1B]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
B [auth 1B]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
B [auth 1B]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
B [auth 1B]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
B [auth 1B]IPR002171Large ribosomal subunit protein uL2Family
G [auth 1G]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth 1G]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth 1G]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth 1G]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
G [auth 1G]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
H [auth 1H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth 1H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth 1H]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth 1H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth 1H]IPR000244Large ribosomal subunit protein bL9Family
I [auth 1I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
I [auth 1I]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
I [auth 1I]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
I [auth 1I]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
K [auth 1K]IPR005822Large ribosomal subunit protein uL13Family
K [auth 1K]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
K [auth 1K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth 1L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth 1L]IPR000218Large ribosomal subunit protein uL14Family
L [auth 1L]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth 1L]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
M [auth 1M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth 1M]IPR030878Large ribosomal subunit protein uL15Family
M [auth 1M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth 1M]IPR063184Ribosomal protein uL15, N-terminal regionDomain
M [auth 1M]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
P [auth 1P]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
P [auth 1P]IPR057268Large ribosomal subunit protein uL18Family
Q [auth 1Q]IPR001857Large ribosomal subunit protein bL19Family
Q [auth 1Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Q [auth 1Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth 1U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth 1U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U [auth 1U]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth 1X]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
X [auth 1X]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth 1X]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
X [auth 1X]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
X [auth 1X]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
X [auth 1X]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
Y [auth 1Y]IPR001684Large ribosomal subunit protein bL27Family
Y [auth 1Y]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
GA [auth 1g]IPR021137Large ribosomal subunit protein bL35-likeFamily
GA [auth 1g]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IA [auth 1i]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
KA [auth 1k]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
KA [auth 1k]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
KA [auth 1k]IPR039927Large ribosomal subunit protein mL43Family
LA [auth 1l]IPR040008Large ribosomal subunit protein mL46Family
LA [auth 1l]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
ZA [auth A]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
ZA [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
ZA [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
ZA [auth A]IPR001865Small ribosomal subunit protein uS2Family
CB [auth D]IPR000851Small ribosomal subunit protein uS5Family
CB [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
CB [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
CB [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
CB [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DB [auth E]IPR000529Small ribosomal subunit protein bS6Family
DB [auth E]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
DB [auth E]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
HB [auth I]IPR001848Small ribosomal subunit protein uS10Family
HB [auth I]IPR027486Small ribosomal subunit protein uS10 domainDomain
HB [auth I]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
KB [auth L]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
KB [auth L]IPR001892Small ribosomal subunit protein uS13Family
KB [auth L]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
KB [auth L]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
LB [auth M]IPR001209Small ribosomal subunit protein uS14Family
LB [auth M]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
MB [auth N]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
MB [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
MB [auth N]IPR000589Small ribosomal subunit protein uS15Family
NB [auth O]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
NB [auth O]IPR000307Small ribosomal subunit protein bS16Family
SB [auth T]IPR044695Small ribosomal subunit protein bTHXc/bTHXc, plantFamily
SB [auth T]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
VB [auth W]IPR019368Small ribosomal subunit protein mS29Family
CC [auth d]IPR019083Small ribosomal subunit protein mS41, SAM domainDomain
DC [auth e]IPR052851Small ribosomal subunit protein mS75Family
HC [auth k]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HC [auth k]IPR052462SRA stem-loop-interacting RNA-binding protein/Glycine-rich RNA-binding-likeFamily
HC [auth k]IPR000504RNA recognition motif domainDomain
HC [auth k]IPR035979RNA-binding domain superfamilyHomologous Superfamily
RB [auth S]IPR001911Small ribosomal subunit protein bS21Family
AB [auth B]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
AB [auth B]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
AB [auth B]IPR044954Small ribosomal subunit protein uS3m, plantFamily
AB [auth B]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
JA [auth 1j]IPR019189Large ribosomal subunit protein mL41Family
FA [auth 1f]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
FA [auth 1f]IPR000271Large ribosomal subunit protein bL34Family
BA [auth 1b]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth 1b]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
BA [auth 1b]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
T [auth 1T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth 1T]IPR001063Large ribosomal subunit protein uL22Family
T [auth 1T]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth 1T]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
R [auth 1R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
R [auth 1R]IPR005813Large ribosomal subunit protein bL20Family