9MR7 | pdb_00009mr7

Genetiocally detoxified pertussis toxin in complex with hu1B7 Fab and hu11E6 Fab

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Bacterial enterotoxins	8041863	3000434	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial enterotoxins	8041854	3000434	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	C-type lectin-like	8037123	3001261	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ADP-ribosylation	8037004	3001208	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F	PF09276	Pertussis toxin S5 subunit (Pertus-S5-tox)	Pertussis toxin S5 subunit	Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1].	Domain
D, E	PF09275	Pertussis toxin S4 subunit (Pertus-S4-tox)	Pertussis toxin S4 subunit	Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1].	Domain
C	PF03440	Aerolysin/Pertussis toxin (APT) domain (APT)	Aerolysin/Pertussis toxin (APT) domain	This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold.	Domain
C	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3)	Pertussis toxin, subunit 2 and 3, C-terminal domain		Domain
B	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3)	Pertussis toxin, subunit 2 and 3, C-terminal domain		Domain
A	PF02917	Pertussis toxin, subunit 1 (Pertussis_S1)	Pertussis toxin, subunit 1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
J, L	hu11E6 Fab heavy chain	-	-	-
I, K	hu11E6 Fab light chain	-	-	-
H	hu1B7 Fab heavy chain	-	-	-
G	hu1B7 Fab light chain	-	-	-
F	Pertussis toxin subunit 5	toxin activity	-	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part extracellular region
D, E	Pertussis toxin subunit 4	toxin activity	-	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part extracellular region
C	Pertussis toxin subunit 3	toxin activity	-	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part extracellular region
B	Pertussis toxin subunit 2	toxin activity	symbiont-mediated activation of host MAPK cascade symbiont-mediated perturbation of host MAPK cascade symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated activation of host signal transduction pathway symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part extracellular region
A	Pertussis toxin subunit 1	pentosyltransferase activity NAD+ poly-ADP-ribosyltransferase activity glycosyltransferase activity transferase activity catalytic activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups toxin activity	symbiont-mediated activation of host G protein-coupled receptor signal transduction symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated activation of host signal transduction pathway biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host process symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated perturbation of host receptor-mediated signal transduction modulation of process of another organism	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F	IPR015356	Pertussis toxin, subunit S5	Family
F	IPR008992	Enterotoxin	Homologous Superfamily
D, E	IPR015355	Pertussis toxin, subunit S4	Family
D, E	IPR008992	Enterotoxin	Homologous Superfamily
C	IPR005138	Aerolysin/Pertussis toxin domain	Domain
C	IPR016187	C-type lectin fold	Homologous Superfamily
C	IPR037015	Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily	Homologous Superfamily
C	IPR008992	Enterotoxin	Homologous Superfamily
C	IPR003899	Bordetella pertussis toxin B	Family
C	IPR020063	Bordetella pertussis toxin B, subunit 2/3, C-terminal	Domain
B	IPR005138	Aerolysin/Pertussis toxin domain	Domain
B	IPR016187	C-type lectin fold	Homologous Superfamily
B	IPR037015	Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily	Homologous Superfamily
B	IPR008992	Enterotoxin	Homologous Superfamily
B	IPR003899	Bordetella pertussis toxin B	Family
B	IPR020063	Bordetella pertussis toxin B, subunit 2/3, C-terminal	Domain
A	IPR003898	Bordetella pertussis toxin A	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.