2YH3 | pdb_00002yh3

The structure of BamB from E. coli

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APQQ_2e2yh3A1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PQQ_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13360Outer membrane protein assembly factor BamB (PQQ_2)Outer membrane protein assembly factor BamB- Repeat
PF01011Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain (PQQ)Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
LIPOPROTEIN YFGL

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018391Pyrrolo-quinoline quinone beta-propeller repeatRepeat
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
IPR017687Outer membrane protein assembly factor BamBFamily
IPR002372Pyrrolo-quinoline quinone repeat domainDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELOmp85-TpsB Outer Membrane Transporter SuperfamilyBamB component of the Bam β-barrel assembly machine