22GK | pdb_000022gk

C5a bound C5aR2 in complex with beta-arrestin1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth A]SCOP2B SuperfamilyArrestin/Vps26-like 8055051 3002071 SCOP2B (2022-06-29)
A [auth C]SCOP2B SuperfamilyAnaphylotoxins (complement system) 8037606 3000387 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth R]PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins [1].
Domain
E [auth A]PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Domain
E [auth A]PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Domain
A [auth C]PF01821Anaphylotoxin-like domain (ANATO)Anaphylotoxin-like domainC3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins. ...C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth R]C5a anaphylatoxin chemotactic receptor 2
E [auth A]Beta-arrestin-1
D [auth L]Fab30 light chain---
C [auth H]Fab30 heavy chain---
A [auth C]C5a anaphylatoxin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth R]IPR002234Anaphylatoxin chemotactic receptor, C3a/C5a1/C5a2Family
B [auth R]IPR000826Formyl peptide receptor-relatedFamily
B [auth R]IPR000276G protein-coupled receptor, rhodopsin-likeFamily
B [auth R]IPR017452GPCR, rhodopsin-like, 7TMDomain
E [auth A]IPR011022Arrestin-like, C-terminal domainDomain
E [auth A]IPR000698ArrestinFamily
E [auth A]IPR011021Arrestin-like, N-terminalDomain
E [auth A]IPR014753Arrestin, N-terminalHomologous Superfamily
E [auth A]IPR014756Immunoglobulin E-setHomologous Superfamily
E [auth A]IPR017864Arrestin, conserved siteConserved Site
E [auth A]IPR014752Arrestin-like, C-terminal domain superfamilyHomologous Superfamily
A [auth C]IPR009048Alpha-macroglobulin, receptor-bindingDomain
A [auth C]IPR041555Macroglobulin domain MG3Domain
A [auth C]IPR001599Alpha-2-macroglobulinDomain
A [auth C]IPR048843Complement component 5, CUB domainDomain
A [auth C]IPR018081Anaphylatoxin, complement systemHomologous Superfamily
A [auth C]IPR018933Netrin module, non-TIMP typeDomain
A [auth C]IPR001840Anaphylatoxin, complement system domainDomain
A [auth C]IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
A [auth C]IPR011625Alpha-2-macroglobulin, bait region domainDomain
A [auth C]IPR001134Netrin domainDomain
A [auth C]IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
A [auth C]IPR011626Alpha-macroglobulin-like, TED domainDomain
A [auth C]IPR000020Anaphylatoxin/fibulinDomain
A [auth C]IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
A [auth C]IPR002890Macroglobulin domainDomain
A [auth C]IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth C]IPR050473Alpha-2-macroglobulin/Complement systemFamily
A [auth C]IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
A [auth C]IPR040839Macroglobulin domain MG4Domain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth R]SEP Parent Component: SER

AA0037

:  O-phospho-L-serine MOD:00046
B [auth R]TPO Parent Component: THR

AA0037 , AA0038

:  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047