10LM | pdb_000010lm

Native flagellar filament from Leptospira biflexa

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	PF00700	Bacterial flagellin C-terminal helical region (Flagellin_C)	Bacterial flagellin C-terminal helical region	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].	Domain
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	PF00669	Bacterial flagellin N-terminal helical region (Flagellin_N)	Bacterial flagellin N-terminal helical region	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
GE [auth b2], HE [auth b3], IE [auth b4]	LEPBI_I0662 protein	-	-	-
BE [auth a1], CE [auth a2], DE [auth a3], EE [auth a4], FE [auth a5]	LEPBI_I3081 protein	-	-	-
AE [auth Za], XD [auth Z0], YD [auth Z1], ZD [auth Z2]	FlaA2-associated protein FlaAP	-	-	-
TD [auth Y1], UD [auth Y2], VD [auth Y3], WD [auth Y4]	FlaA2 associated protein B0STF2	-	-	-
JD [auth V0], KD [auth V1], LD [auth V2], MD [auth V3], ND [auth V4], JD [auth V0], KD [auth V1], LD [auth V2], MD [auth V3], ND [auth V4], OD [auth X0], PD [auth X1], QD [auth X2], RD [auth X3], SD [auth X4]	Flagellar filament outer layer protein (Sheath protein) putative signal peptide	-	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cellular anatomical structure extracellular region outer membrane-bounded periplasmic space cell envelope periplasmic space cell projection extracellular organelle organelle membraneless organelle periplasmic flagellum extracellular membraneless organelle bacterial-type flagellum
FD [auth U3], GD [auth U4], HD [auth U5], ID [auth U6]	LEPBI_I1029 protein	-	-	-
AD [auth S2], BD [auth S3], CD [auth S4], DD [auth S5], ED [auth S6], AD [auth S2], BD [auth S3], CD [auth S4], DD [auth S5], ED [auth S6], RC [auth Q1], SC [auth Q2], TC [auth Q3], UC [auth Q4], VC [auth R1], WC [auth R2], XC [auth R3], YC [auth R4], ZC [auth R5]	Flagellar Coiling Protein FcpB	-	-	-
AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], FC [auth N6], GC [auth O1], HC [auth O2], IC [auth O3], JC [auth O4], KC [auth O5], LC [auth P1], MC [auth P2], NC [auth P3], OC [auth P4], PC [auth P5], QB [auth L1], QC [auth P6], RB [auth L2], SB [auth L3], TB [auth L4], UB [auth L5], VB [auth M1], WB [auth M2], XB [auth M3], YB [auth M4], ZB [auth M5]	Flagellar Coiling Protein FcpA	-	-	-
JE [auth c1], KE [auth c2], LE [auth c3]	LEPBI_II0033 protein	-	-	-
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	Flagellin	structural molecule activity	-	cell projection cellular anatomical structure extracellular organelle extracellular region organelle membraneless organelle periplasmic flagellum extracellular membraneless organelle periplasmic space bacterial-type flagellum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BE [auth a1], CE [auth a2], DE [auth a3], EE [auth a4], FE [auth a5]	IPR058079	LIC_12936-like	Family
JD [auth V0], KD [auth V1], LD [auth V2], MD [auth V3], ND [auth V4], JD [auth V0], KD [auth V1], LD [auth V2], MD [auth V3], ND [auth V4], OD [auth X0], PD [auth X1], QD [auth X2], RD [auth X3], SD [auth X4]	IPR006714	Flagellar filament outer layer protein FlaA	Family
FD [auth U3], GD [auth U4], HD [auth U5], ID [auth U6]	IPR058230	Surface protein adhesin OmpL37	Family
AD [auth S2], BD [auth S3], CD [auth S4], DD [auth S5], ED [auth S6], AD [auth S2], BD [auth S3], CD [auth S4], DD [auth S5], ED [auth S6], RC [auth Q1], SC [auth Q2], TC [auth Q3], UC [auth Q4], VC [auth R1], WC [auth R2], XC [auth R3], YC [auth R4], ZC [auth R5]	IPR058173	FcpB	Family
AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], FC [auth N6], GC [auth O1], HC [auth O2], IC [auth O3], JC [auth O4], KC [auth O5], LC [auth P1], MC [auth P2], NC [auth P3], OC [auth P4], PC [auth P5], QB [auth L1], QC [auth P6], RB [auth L2], SB [auth L3], TB [auth L4], UB [auth L5], VB [auth M1], WB [auth M2], XB [auth M3], YB [auth M4], ZB [auth M5]	IPR058091	FcpA	Family
AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], AC [auth N1], BC [auth N2], CC [auth N3], DC [auth N4], EC [auth N5], FC [auth N6], GC [auth O1], HC [auth O2], IC [auth O3], JC [auth O4], KC [auth O5], LC [auth P1], MC [auth P2], NC [auth P3], OC [auth P4], PC [auth P5], QB [auth L1], QC [auth P6], RB [auth L2], SB [auth L3], TB [auth L4], UB [auth L5], VB [auth M1], WB [auth M2], XB [auth M3], YB [auth M4], ZB [auth M5]	IPR060703	FcpA-like	Family
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	IPR046358	Flagellin, C-terminal domain	Domain
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	IPR001029	Flagellin, N-terminal domain	Domain
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	IPR042187	Flagellin, C-terminal domain, subdomain 2	Homologous Superfamily
A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], A [auth A3], AA [auth E2], AB [auth I6], B [auth A4], BA [auth E3], BB [auth I7], C [auth A5], CA [auth E4], CB [auth I8], D [auth A6], DA [auth E5], DB [auth I9], E [auth A7], EA [auth E6], EB [auth J4], F [auth A8], FA [auth E7], FB [auth J5], G [auth B3], GA [auth F1], GB [auth J6], H [auth B4], HA [auth F2], HB [auth J7], I [auth B5], IA [auth F3], IB [auth J8], J [auth B6], JA [auth F4], JB [auth J9], K [auth B7], KA [auth F5], KB [auth K3], L [auth B8], LA [auth F6], LB [auth K4], M [auth C2], MA [auth G1], MB [auth K5], ME [auth h0], N [auth C3], NA [auth G2], NB [auth K6], NE [auth i0], O [auth C4], OA [auth G5], OB [auth K7], P [auth C5], PA [auth G6], PB [auth K8], Q [auth C6], QA [auth G7], R [auth C7], RA [auth G8], S [auth C8], SA [auth G9], T [auth D2], TA [auth H5], U [auth D3], UA [auth H6], V [auth D4], VA [auth H7], W [auth D5], WA [auth H8], X [auth D6], XA [auth H9], Y [auth D7], YA [auth I4], Z [auth E1], ZA [auth I5]	IPR001492	Flagellin	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.