3FWW | pdb_00003fww

The crystal structure of the bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase from Yersinia pestis CO92

• PDB DOI: https://doi.org/10.2210/pdb3FWW/pdb

• Classification: TRANSFERASE
• Organism(s): Yersinia pestis Pestoides F
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-01-19 Released: 2009-03-24 
• Deposition Author(s): Zhang, R., Gu, M., Stam, J., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 
  0.277 (Depositor), 0.290 (DCC) 
• R-Value Work: 
  0.214 (Depositor), 0.240 (DCC) 
• R-Value Observed: 
  0.217 (Depositor) 

Starting Model: experimental

Literature

The crystal structure of the bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase from Yersinia pestis CO92

Zhang, R., Gu, M., Anderson, W., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D3  (Explore in 3D)
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 48.9 kDa 
• Atom Count: 3,355 
• Modeled Residue Count: 445 
• Deposited Residue Count: 456 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bifunctional protein glmU	A	456	Yersinia pestis Pestoides F	Mutation(s): 0  Gene Names: gi: 16124227, glmU, YPDSF_3916 EC: 2.7.7.23 (PDB Primary Data), 2.3.1.157 (PDB Primary Data)
UniProt
Find proteins for A4TSJ5 (Yersinia pestis (strain Pestoides F)) Explore A4TSJ5  Go to UniProtKB:  A4TSJ5

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free:  0.277 (Depositor), 0.290 (DCC) 
• R-Value Work:  0.214 (Depositor), 0.240 (DCC) 
• R-Value Observed: 0.217 (Depositor) 

Space Group: P 6₃ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 88.318	α = 90
b = 88.318	β = 90
c = 251.931	γ = 120

Software Package:

Software Name	Purpose
SBC-Collect	data collection
MERLOT	phasing
PHENIX	refinement
HKL-3000	data reduction
HKL-3000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-03-24 
Deposition Author(s): Zhang, R., Gu, M., Stam, J., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2009-03-24
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2023-09-06
  Changes: Data collection, Database references, Refinement description