GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4G5R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4G5R_GDP_A_401 | 55% | 43% | 0.204 | 0.973 | 0.89 | 1.31 | 1 | 4 | 2 | 0 | 100% | 1 |
| 4G5R_GDP_C_401 | 51% | 47% | 0.21 | 0.967 | 0.94 | 1.1 | 1 | 2 | 3 | 0 | 100% | 1 |
| 4G5R_GDP_B_401 | 47% | 44% | 0.232 | 0.972 | 0.93 | 1.24 | 1 | 3 | 4 | 0 | 100% | 1 |
| 4G5R_GDP_D_401 | 46% | 46% | 0.232 | 0.971 | 0.93 | 1.14 | 1 | 2 | 1 | 0 | 100% | 1 |
| 2ODE_GDP_C_1002 | 97% | 45% | 0.064 | 0.979 | 1.12 | 0.99 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2IHB_GDP_A_356 | 93% | 49% | 0.092 | 0.988 | 0.88 | 1.1 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4G5O_GDP_C_401 | 79% | 44% | 0.141 | 0.989 | 0.98 | 1.18 | 2 | 2 | 1 | 0 | 100% | 1 |
| 6MHF_GDP_A_401 | 67% | 6% | 0.159 | 0.967 | 3.68 | 1.42 | 13 | 6 | 0 | 0 | 100% | 1 |
| 2V4Z_GDP_A_1348 | 66% | 47% | 0.18 | 0.987 | 0.93 | 1.11 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
