NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 2PDI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2PDI_NAP_A_500 | 93% | 19% | 0.078 | 0.972 | 1.67 | 1.79 | 11 | 15 | 2 | 0 | 100% | 1 |
| 2J8T_NAP_A_1316 | 100% | 49% | 0.033 | 0.996 | 0.97 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
| 3T42_NAP_A_316 | 100% | 49% | 0.03 | 0.992 | 0.93 | 1.02 | 4 | 1 | 1 | 0 | 100% | 1 |
| 9FB3_NAP_A_402 | 100% | 63% | 0.03 | 0.993 | 0.63 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 3LQL_NAP_A_500 | 100% | 43% | 0.035 | 0.996 | 1.13 | 1.07 | 3 | 4 | 1 | 0 | 100% | 1 |
| 3LD5_NAP_A_500 | 100% | 31% | 0.033 | 0.993 | 1.34 | 1.4 | 7 | 6 | 2 | 0 | 100% | 1 |
| 2DBQ_NAP_A_401 | 100% | 24% | 0.017 | 0.998 | 1.42 | 1.71 | 7 | 16 | 0 | 0 | 100% | 1 |
| 2EXX_NAP_A_3698 | 100% | 10% | 0.025 | 0.996 | 1.63 | 2.7 | 7 | 18 | 9 | 0 | 100% | 1 |
| 6IJX_NAP_A_401 | 100% | 59% | 0.014 | 0.998 | 0.63 | 0.95 | 1 | 3 | 4 | 0 | 100% | 1 |
| 9FOB_NAP_A_401 | 100% | 56% | 0.023 | 0.996 | 0.78 | 0.91 | 2 | 3 | 1 | 0 | 100% | 1 |
| 9OOI_NAP_B_301 | 100% | 29% | 0.025 | 0.997 | 1.81 | 1.07 | 5 | 4 | 6 | 0 | 100% | 1 |
