9DY7 | pdb_00009dy7

Proteus vulgaris tryptophan indole-lyase complexed with L-ethionine and Na+

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPLP-dependent transferases 8032354 3000954 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPLP-dependent transferases 8032354 3000954 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPLP-dependent transferases 8032354 3000954 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPLP-dependent transferases 8032354 3000954 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF01212Beta-eliminating lyase (Beta_elim_lyase)Beta-eliminating lyaseDomain
B, D
PF01212Beta-eliminating lyase (Beta_elim_lyase)Beta-eliminating lyaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Tryptophanase (with internal aldimine) - -
B, D
Tryptophanase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR015424Pyridoxal phosphate-dependent transferaseHomologous Superfamily
A, C
IPR013440TryptophanaseFamily
A, C
IPR001597Aromatic amino acid beta-eliminating lyase/threonine aldolaseDomain
A, C
IPR018176Tryptophanase, conserved siteConserved Site
A, C
IPR015421Pyridoxal phosphate-dependent transferase, major domainHomologous Superfamily
A, C
IPR015422Pyridoxal phosphate-dependent transferase, small domainHomologous Superfamily
A, C
IPR011166Beta-eliminating lyase familyFamily
B, D
IPR015424Pyridoxal phosphate-dependent transferaseHomologous Superfamily
B, D
IPR013440TryptophanaseFamily
B, D
IPR001597Aromatic amino acid beta-eliminating lyase/threonine aldolaseDomain
B, D
IPR018176Tryptophanase, conserved siteConserved Site
B, D
IPR015421Pyridoxal phosphate-dependent transferase, major domainHomologous Superfamily
B, D
IPR015422Pyridoxal phosphate-dependent transferase, small domainHomologous Superfamily
B, D
IPR011166Beta-eliminating lyase familyFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, C
LLP Parent Component: LYS

RESID:  AA0119

PSI-MOD :  N6-pyridoxal phosphate-L-lysine MOD:00128