8AYJ | pdb_00008ayj

Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiens complexed with 3-aminooxypropionic acid

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAminotran_4_Ne8ayjA1 A: a+b two layersX: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)H: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)T: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4_NECOD (1.6)
AAminotran_4_Ce8ayjA2 A: a+b two layersX: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)H: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)T: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4_CECOD (1.6)
BAminotran_4_Ne8ayjB2 A: a+b two layersX: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)H: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)T: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4_NECOD (1.6)
BAminotran_4_Ce8ayjB1 A: a+b two layersX: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)H: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes (From Topology)T: barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01063Amino-transferase class IV (Aminotran_4)Amino-transferase class IVThe D-amino acid transferases (D-AAT) are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the diff ...The D-amino acid transferases (D-AAT) are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Aminotransferase class IV -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050571Class-IV Pyridoxal-Phosphate-Dependent AminotransferaseFamily
A, B
IPR043132Branched-chain-amino-acid aminotransferase-like, C-terminalHomologous Superfamily
A, B
IPR043131Branched-chain-amino-acid aminotransferase-like, N-terminalHomologous Superfamily
A, B
IPR001544Aminotransferase class IVFamily
A, B
IPR036038Aminotransferase-like, PLP-dependent enzymesHomologous Superfamily