6YRD | pdb_00006yrd

SFX structure of dye-type peroxidase DtpB in the ferryl state

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6yrda_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)
B	d6yrdb_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)
C	d6yrdc_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)
D	d6yrdd_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)
E	d6yrde_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)
F	d6yrdf_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Streptomyces lividans 1326 ) [TaxId: 1200984 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Dyp_perox_C	e6yrdA1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
A	Dyp_perox_N_1	e6yrdA2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)
B	Dyp_perox_C	e6yrdB2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
B	Dyp_perox_N_1	e6yrdB1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)
C	Dyp_perox_C	e6yrdC1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
C	Dyp_perox_N_1	e6yrdC2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)
D	Dyp_perox_C	e6yrdD2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
D	Dyp_perox_N_1	e6yrdD1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)
E	Dyp_perox_C	e6yrdE1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
E	Dyp_perox_N_1	e6yrdE2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)
F	Dyp_perox_C	e6yrdF1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_C	ECOD (1.6)
F	Dyp_perox_N_1	e6yrdF2	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: Dyp_perox_N_1	ECOD (1.6)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.