Corrinoid protein reactivation complex with activator
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089867 | 3000643 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089867 | 3000643 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089867 | 3000643 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089867 | 3000643 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089865 | 3000643 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | AcsC Fe-S domain-like | 8089863 | 3002395 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | AcsC C-terminal domain-like | 8089866 | 3002396 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | AcsC Fe-S domain-like | 8089863 | 3002395 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089865 | 3000643 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | AcsC C-terminal domain-like | 8089866 | 3002396 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089865 | 3000643 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | AcsC Fe-S domain-like | 8089863 | 3002395 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | AcsC C-terminal domain-like | 8089866 | 3002396 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | AcsC C-terminal domain-like | 8089866 | 3002396 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Dihydropteroate synthetase-like | 8089865 | 3000643 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | AcsC Fe-S domain-like | 8089863 | 3002395 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| K | EUF08308 | e4c1nK3 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology) | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: EUF08308 | ECOD (1.6) |
| K | DUF4445_C | e4c1nK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_C | ECOD (1.6) |
| K | DUF4445_N | e4c1nK2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_N | ECOD (1.6) |
| L [auth X] | EUF08308 | e4c1nX3 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology) | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: EUF08308 | ECOD (1.6) |
| L [auth X] | DUF4445_C | e4c1nX1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_C | ECOD (1.6) |
| L [auth X] | DUF4445_N | e4c1nX2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_N | ECOD (1.6) |
| J | EUF08308 | e4c1nJ3 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology) | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: EUF08308 | ECOD (1.6) |
| J | DUF4445_C | e4c1nJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_C | ECOD (1.6) |
| J | DUF4445_N | e4c1nJ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_N | ECOD (1.6) |
| I | EUF08308 | e4c1nI3 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology) | T: Reductive activator for corrinoid/iron-sulfur protein second domain | F: EUF08308 | ECOD (1.6) |
| I | DUF4445_C | e4c1nI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_C | ECOD (1.6) |
| I | DUF4445_N | e4c1nI2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: DUF4445_N | ECOD (1.6) |
| H | CdhD_N | e4c1nH1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| F | CdhD_N | e4c1nF1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| D | CdhD_N | e4c1nD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| B | CdhD_N | e4c1nB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| G | CdhD_N | e4c1nG3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| G | CdhD_C | e4c1nG1 | A: a/b three-layered sandwiches | X: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: CdhD_C | ECOD (1.6) |
| G | FeS | e4c1nG2 | A: few secondary structure elements | X: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: FeS | ECOD (1.6) |
| E | CdhD_N | e4c1nE3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| E | CdhD_C | e4c1nE1 | A: a/b three-layered sandwiches | X: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: CdhD_C | ECOD (1.6) |
| E | FeS | e4c1nE2 | A: few secondary structure elements | X: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: FeS | ECOD (1.6) |
| C | CdhD_N | e4c1nC3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| C | CdhD_C | e4c1nC1 | A: a/b three-layered sandwiches | X: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: CdhD_C | ECOD (1.6) |
| C | FeS | e4c1nC2 | A: few secondary structure elements | X: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: FeS | ECOD (1.6) |
| A | CdhD_N | e4c1nA3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: CdhD_N | ECOD (1.6) |
| A | CdhD_C | e4c1nA1 | A: a/b three-layered sandwiches | X: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: CdhD_C | ECOD (1.6) |
| A | FeS | e4c1nA2 | A: few secondary structure elements | X: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology) | T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | F: FeS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17651 | RACo middle region (Raco_middle) | RACo middle region | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain | |
| PF17650 | RACo linker region (RACo_linker) | RACo linker region | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain | |
| PF14574 | C-terminal domain of RACo the ASKHA domain (RACo_C_ter) | C-terminal domain of RACo the ASKHA domain | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain | |
| I, J, L [auth X] | PF17651 | RACo middle region (Raco_middle) | RACo middle region | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain |
| I, J, L [auth X] | PF17650 | RACo linker region (RACo_linker) | RACo linker region | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain |
| I, J, L [auth X] | PF14574 | C-terminal domain of RACo the ASKHA domain (RACo_C_ter) | C-terminal domain of RACo the ASKHA domain | This family includes reductive activator of CoFeSP (RACo) proteins, Swiss:Q3ACS2. Structure analysis of RACo indicate that it contains 4 regions: N-terminal region Pfam:PF00111 (residues 3-94) binding the [2Fe-2S] cluster, a linker region (residues 9 ... | Domain |
| PF03599 | CO dehydrogenase/acetyl-CoA synthase delta subunit (CdhD) | CO dehydrogenase/acetyl-CoA synthase delta subunit | - | Family | |
| PF04060 | Putative Fe-S cluster (FeS) | Putative Fe-S cluster | This family includes a domain with four conserved cysteines that probably form an Fe-S redox cluster. | Domain | |
| PF03599 | CO dehydrogenase/acetyl-CoA synthase delta subunit (CdhD) | CO dehydrogenase/acetyl-CoA synthase delta subunit | - | Family |














