1WWC | pdb_00001wwc

NT3 BINDING DOMAIN OF HUMAN TRKC RECEPTOR

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1wwca_	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	I set domains	NT3 binding domain of trkC receptor	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	I set domains	8054814	4007543	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Immunoglobulin (Ig) domain-like	8054815	3000071	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	I-set_11	e1wwcA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: I-set_11	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07679	Immunoglobulin I-set domain (I-set)	Immunoglobulin I-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PROTEIN (NT-3 GROWTH FACTOR RECEPTOR TRKC)	molecular transducer activity catalytic activity, acting on a protein GPI-linked ephrin receptor activity ephrin receptor activity kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity molecular transducer activity catalytic activity, acting on a protein GPI-linked ephrin receptor activity ephrin receptor activity kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity neurotrophin binding protein binding binding growth factor binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding neurotrophin receptor activity p53 binding	developmental process ear development sensory organ development inner ear development cochlea development animal organ development anatomical structure development heart development multicellular organism development multicellular organismal process circulatory system development system development epithelium development cellular developmental process developmental process ear development sensory organ development inner ear development cochlea development animal organ development anatomical structure development heart development multicellular organism development multicellular organismal process circulatory system development system development epithelium development cellular developmental process eye development visual system development tissue development epithelial cell differentiation cell differentiation camera-type eye development lens fiber cell differentiation cellular process sensory system development lens development in camera-type eye peripheral nervous system axon ensheathment peripheral nervous system development cell development nervous system development glial cell development myelination neurogenesis Schwann cell development gliogenesis axon ensheathment ensheathment of neurons glial cell differentiation myelination in peripheral nervous system Schwann cell differentiation regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process cell population proliferation regulation of cell population proliferation neural precursor cell proliferation regulation of neural precursor cell proliferation positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death positive regulation of apoptotic process apoptotic process programmed cell death cellular response to stimulus response to lipid response to stimulus response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to chemical stimulus cellular response to retinoic acid response to chemical cellular response to lipid cellular response to endogenous stimulus cellular response to growth factor stimulus response to endogenous stimulus cellular response to nerve growth factor stimulus response to nerve growth factor response to growth factor response to ketone response to alcohol response to glucocorticoid response to corticosterone response to mineralocorticoid response to corticosteroid response to hormone response to steroid hormone regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cell projection organization neuron projection development cellular component organization neuron differentiation positive regulation of neuron projection development positive regulation of cell projection organization cellular component organization or biogenesis plasma membrane bounded cell projection organization regulation of cell projection organization generation of neurons neuron development regulation of plasma membrane bounded cell projection organization system process nervous system process action potential propagation action potential transmission of nerve impulse cell communication neuronal action potential propagation regulation of biological quality regulation of membrane potential regulation of developmental process astrocyte differentiation negative regulation of biological process regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis regulation of astrocyte differentiation regulation of cell development regulation of nervous system development negative regulation of neurogenesis negative regulation of cellular process regulation of multicellular organismal process negative regulation of nervous system development negative regulation of cell differentiation regulation of multicellular organismal development negative regulation of developmental process regulation of glial cell differentiation negative regulation of astrocyte differentiation negative regulation of gliogenesis negative regulation of cell development negative regulation of glial cell differentiation central nervous system development negative regulation of multicellular organismal process neuron fate commitment cell fate specification neuron fate specification cell fate commitment rhythmic process circadian rhythm positive regulation of nervous system development positive regulation of developmental process cellular component biogenesis cellular component assembly cell junction assembly regulation of synapse structure or activity synapse organization regulation of synapse assembly positive regulation of cellular component biogenesis regulation of cellular component biogenesis regulation of cell junction assembly positive regulation of cell junction assembly regulation of synapse organization cell junction organization positive regulation of multicellular organismal process synapse assembly positive regulation of synapse assembly developmental growth regulation of cellular response to stress positive regulation of axon extension involved in regeneration cell projection morphogenesis positive regulation of sprouting of injured axon sprouting of injured axon regulation of sprouting of injured axon positive regulation of cell development response to external stimulus regulation of response to stimulus regulation of response to external stimulus plasma membrane bounded cell projection morphogenesis cell growth response to axon injury regulation of response to wounding positive regulation of response to external stimulus regulation of extent of cell growth axon regeneration positive regulation of cell differentiation regulation of response to stress positive regulation of neurogenesis regulation of anatomical structure morphogenesis positive regulation of axonogenesis neuron projection extension regulation of developmental growth developmental cell growth growth positive regulation of cell growth axon development regulation of cell growth cell morphogenesis involved in neuron differentiation anatomical structure morphogenesis positive regulation of growth positive regulation of axon regeneration axon extension involved in regeneration axon extension regulation of growth axonogenesis regulation of cellular component size positive regulation of neuron projection regeneration regeneration neuron projection regeneration regulation of axon extension involved in regeneration neuron projection morphogenesis response to wounding positive regulation of developmental growth positive regulation of response to wounding regulation of axon regeneration developmental growth involved in morphogenesis regulation of neuron projection regeneration cell morphogenesis positive regulation of response to stimulus regulation of axon extension cellular response to stress response to stress regulation of axonogenesis positive regulation of axon extension regulation of cell size regulation of anatomical structure size regulation of presynapse assembly regulation of presynapse organization presynapse organization presynapse assembly mechanoreceptor differentiation postsynaptic density organization postsynapse organization organelle assembly postsynaptic specialization assembly postsynapse assembly excitatory synapse assembly organelle organization postsynaptic specialization organization postsynaptic density assembly positive regulation of cell communication regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signal transduction signaling regulation of signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette signal transduction regulation of signaling positive regulation of intracellular signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction regulation of cell communication phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signaling response to ethanol positive regulation of cell population proliferation positive chemotaxis chemotaxis positive regulation of locomotion positive regulation of positive chemotaxis regulation of chemotaxis positive regulation of chemotaxis regulation of positive chemotaxis taxis regulation of locomotion locomotion positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade regulation of cell motility positive regulation of cell migration positive regulation of cell motility regulation of cell migration cell migration cell motility cell surface receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway neuron migration	cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane intracellular anatomical structure cytoplasm glutamatergic synapse protein-containing complex cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane intracellular anatomical structure cytoplasm glutamatergic synapse protein-containing complex receptor complex axon cell projection neuron projection plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A	IPR008266	Tyrosine-protein kinase, active site	Active Site
A	IPR020635	Tyrosine-protein kinase, catalytic domain	Domain
A	IPR000719	Protein kinase domain	Domain
A	IPR003599	Immunoglobulin domain subtype	Domain
A	IPR001611	Leucine-rich repeat	Repeat
A	IPR013151	Immunoglobulin-like beta-sandwich domain	Domain
A	IPR020777	Growth factor receptor NTRK	Family
A	IPR031635	Growth factor receptor NTRK, leucine rich repeat C-terminal	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR000483	Cysteine-rich flanking region, C-terminal	Domain
A	IPR007110	Immunoglobulin-like domain	Domain
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR000372	Leucine-rich repeat N-terminal domain	Domain
A	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A	IPR013098	Immunoglobulin I-set	Domain
A	IPR002011	Tyrosine-protein kinase, receptor class II, conserved site	Conserved Site
A	IPR020446	NT-3 growth factor receptor NTRK3	Family
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR050122	Receptor Tyrosine Kinase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q16288	malignant glioma status epilepticus congenital mesoblastic nephroma fibrosarcoma mixed glioma endometriosis lung adenocarcinoma lung large cell carcinoma malignant ependymoma medulloblastoma acute myeloid leukemia Non-Convulsive Status Epilepticus attention deficit hyperactivity disorder, inattentive type oligodendroglioma breast carcinoma malignant glioma status epilepticus congenital mesoblastic nephroma fibrosarcoma mixed glioma endometriosis lung adenocarcinoma lung large cell carcinoma malignant ependymoma medulloblastoma acute myeloid leukemia Non-Convulsive Status Epilepticus attention deficit hyperactivity disorder, inattentive type oligodendroglioma breast carcinoma progressive supranuclear palsy gastric adenocarcinoma schizophrenia glioma invasive ductal breast carcinoma lung cancer major depressive disorder non-small cell lung carcinoma atypical teratoid rhabdoid tumor osteosarcoma Pick disease psoriasis Gaucher disease large cell medulloblastoma lung carcinoma malignant colon neoplasm Alzheimer disease breast cancer ovarian cancer pituitary cancer glioblastoma interstitial cystitis thyroid gland papillary carcinoma